Available cell type markers — clustermole

Retrieve the full list of cell type markers in the clustermole database.

Usage

clustermole_markers(species = c("hs", "mm"))

Arguments

species: Species: hs for human or mm for mouse.

Value

A data frame of cell type markers (one gene per row).

Examples

markers <- clustermole_markers()
head(markers)
#> # A tibble: 6 × 8
#>   celltype_full         db    species organ celltype n_genes gene_original gene 
#>   <chr>                 <chr> <chr>   <chr> <chr>      <int> <chr>         <chr>
#> 1 1-cell stage cell (B… Cell… Human   Embr… 1-cell …      32 ACCSL         ACCSL
#> 2 1-cell stage cell (B… Cell… Human   Embr… 1-cell …      32 ACVR1B        ACVR…
#> 3 1-cell stage cell (B… Cell… Human   Embr… 1-cell …      32 ASF1B         ASF1B
#> 4 1-cell stage cell (B… Cell… Human   Embr… 1-cell …      32 BCL2L10       BCL2…
#> 5 1-cell stage cell (B… Cell… Human   Embr… 1-cell …      32 BLCAP         BLCAP
#> 6 1-cell stage cell (B… Cell… Human   Embr… 1-cell …      32 CASC3         CASC3