Read in 10x Genomics Cell Ranger Matrix Market format data.
Usage
import_mtx(data_path, gene_column = 2, log_file = NULL)
Arguments
- data_path
Path to directory that holds the files output from 10x.
- gene_column
The column with the gene names.
- log_file
Filename for the log file.
Value
Named list of matrices. One matrix for each data type as specified in
the third column of the features.tsv file. As of Oct 3rd 2019, the two options
are `Gene Expression` and `Antibody Capture`